Directory of Software Resources

Home > Science > Biology > Software

This category is for sites about software aimed primarily at research, evaluation or education in biology. Many branches of Biology have their own category for software which can be reached through the appropriate link. Please submit general-purpose LIMS to the Lab_Computers_and_Software category. Please submit software focused on *clinical* biology to its appropriate category in health or medicine.

Subcategories

• Biochemistry and Molecular Biology
• Bioinformatics
• Ecology
• Electrophoresis
• Evolutionary Biology
• Genetics
• Lab Computers and Software
• Microbiology
• Statistics
• Taxonomy

Resources in This Category

• AutoDRO + ReadySense

  http://www.networkactiv.com/Drosophila/
  Hardware and software for automating the drosophila climbing assay and sugar preference experiments. [Windows]

• Biodata

  http://www.labguru.com/
  Online laboratory management tool that allows researchers to plan, execute, and monitor progress and research data. [Web-based]

• Biosoft

  http://www.biosoft.com/
  Programs for data analysis, graphics, and statistics. [Windows]

• Biospecimen Inventory System

  http://www.bsisystems.com/
  BSI-II is customizable specimen inventory management software. [Windows]

• BioVis3D

  http://www.biovis3d.com/
  Software for reconstructing 3D models from histological serial sections. [Windows]

• Buritrack

  http://brembs.net/buridan/
  Open-source drosophila behavior analysis and tracking software for use with Buridan's Paradigm. [Windows/Mac]

• DNA Dragon

  http://www.dna-dragon.com/
  Sequence assembly and editing software for DNA sequences which also processes trace data and next generation sequencing data. [Windows]

• EPath3D

  http://www.epath3d.com/
  Online package for the diagramming of signaling pathways in biological systems. [Web-based]

• FEI: Amira 3D

  http://www.fei.com/software/amira-3d-for-life-sciences/
  Software platform for visualizing, manipulating and understanding life science and bio-medical data coming from all types of sources and modalities. [Windows/Linux/Mac]

• HemocyTap

  http://hemocytap.wordpress.com/
  App for manually counting cells using a hemocytometer in culture labs. [iPhone]

• HVS Image

  http://www.hvsimage.com/
  Animal tracking software and related accessories for use with the Morris Water Maze and the Barnes Maze. [Windows]

• Kalaimoscope

  http://www.kalaimoscope.com/
  Software for finding, measuring, and tracking objects. Includes support for high-level statistical analysis and grid-computing. [Linux]

• LemnaTec

  http://www.lemnatec.com/
  Image processing software for biotests (Lemna, Bonit, Daphnia). Distributor for various software firms.

• MCID Core

  http://www.mcid.co.uk/software/mcid_core/
  Image analysis software solutions for neuroscience, biology, and other life sciences. [Windows]

• MedeaLAB Tracking

  http://www.medealab.de/englisch/cell_tracking.html
  Motion analysis system for cells, insects, worms, and particles. [Windows]

• MetaSystems

  http://www.metasystems-international.com/
  Manufacturer of automatic microscopy imaging systems for research and routine labs.

• Morpheus

  http://imc.zih.tu-dresden.de/wiki/morpheus
  Modeling and simulation environment for multi-scale and multi-cellular systems. [Windows/Mac/Linux]

• Ruro, Inc

  http://www.ruro.com/
  Software for research, biotechnology, pharmacology, and healthcare laboratories. [Web-based]

• Serf Software Suite

  http://www.bram.org/serf/
  Offers software for immunocytochemistry micrograph analysis, electrophysiology analysis, and genetic data clustering. [Windows]

• SimBiotic Software

  http://simbio.com/
  Provides a range of interactive software for biology education including virtual labs which simulate real life experiments. [Windows/Mac]

• SimThyr

  http://simthyr.sourceforge.net/
  Simulator of thyrotropic feedback control for thyroid homeostasis. [Mac/Windows/Linux]

• Stat-Ease, Inc.

  http://www.statease.com/
  Statistical software, training, and consulting on Design of Experiments for scientists and engineers. [Windows]

• VassarStats

  http://vassarstats.net/
  Online software from Vassar College for calculating probability, linear correlation and regression, chi-square, t-procedures, and ANOVA. [Web-based]

Related Categories

• Home > Computers > Software
• Home > Science > Software
• Home > Science > Chemistry > Software

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