Directory of Genome Databases Resources

Home > Science > Biology > Bioinformatics > Online Services > Genome Databases

Online databases containing complete or partial genomes of particular species.

Resources in This Category

• Annmap Genome Browser

  http://annmap.picr.man.ac.uk/
  An interactive genome browser supporting multiple species. Annmap displays mapping between Affymetrix Exon Arrays and their corresponding genes and exons.

• Annmap Genome Browser

  http://annmap.cruk.manchester.ac.uk/
  An interactive genome browser supporting multiple species. It displays mapping between Affymetrix Exon Arrays and their corresponding genes and exons.

• EURExpress II

  http://www.eurexpress.org/
  A transcriptome-wide atlas database for the developing mouse embryo established by RNA in situ hybridization.

• FlyMine

  http://www.flymine.org/
  An integrated database of genomic, expression and protein data for Drosophila and Anopheles.

• GenomeSeek

  http://genamics.com/genomes/
  A fully-searchable database to provide information and easy access to over 200 current and completed genome projects.

• Gramene: A comparative genomic resource for grains

  http://www.gramene.org/
  Gramene is a curated, open-source data resource that provides agricultural researchers and plant breeders with biological and genomic information on rice and other grasses.

• Human Ageing Genomic Resources

  http://genomics.senescence.info/
  A collection of databases and tools designed to help researchers understand the genetics of human ageing.

• MaizeGDB

  http://www.maizegdb.org/
  MaizeGDB is the community database for biological information about the crop plant Zea mays.

• Mouse Genome Informatics

  http://www.informatics.jax.org/
  This site contains information on mouse genetic markers, mapping, phenotypes, mammalian homology and gene expression. All data are searchable through a set of Query Forms.

• Pedant

  http://pedant.gsf.de/
  Offers analysis of protein sequence sets from individual sequences to complete genomes.

• PhenomicDB

  http://www.phenomicdb.de/
  PhenomicDB is a multi-organism phenotype/genotype database. Users can compare the phenotypes of a gene over many organisms simultaneously.

• Rat Genome Database

  http://rgd.mcw.edu/
  Contains rat genomic data such as genes, SSLPs, ESTs, QTLs, and strain information and tools such as vcmap, genome scanner, rhmap server, metagene. Also has a rat research community forum.

• Saccharomyces Genome Database

  http://www.yeastgenome.org/
  Resource for genomic information on yeast, with tutorial on gene ontology, homology searches and comparisons. Includes links to tools, related conferences, and staff at Stanford University School of Medicine, California.

• Saccharopolyspora erythraea genome

  http://131.111.43.95/
  Website for S. erythraea NRRL23338 genome sequencing project.

• SOL Genomics Network

  http://sgn.cornell.edu/
  Integrated clade oriented genome database for the Solanaceae (tomato, potato, pepper, eggplant etc.) and other Asterids. Contains genetic maps, gene sequences, phenotypic descriptions and images, tomato genome sequence and gene annotations.

Related Categories

• Home > Science > Biology > Genetics > Eukaryotic > Animal > Mammal > Databases and Maps

 

Home > Science > Biology > Bioinformatics > Online Services > Genome Databases

 

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